Welcome to the GTFlow documentation!

Contents

• 1. Installation
  • 1.1. Software Download
  • 1.2. Windows Installation
  • 1.3. MacOS Installation
  • 1.4. License activation
    • 1.4.1. Automatic activation with token
    • 1.4.2. Manual activation with activation- and key files
  • 1.5. Trial version license
• 2. Quick-Start Tutorial
  • 2.1. Opening the built-in sample dataset
  • 2.2. Overlay and masks
  • 2.3. Analyze page
  • 2.4. Defining a reslice stack
  • 2.5. Defining vessel contours
  • 2.6. Flow Statistics
  • 2.7. Scene viewer
  • 2.8. Generating pathlines
  • 2.9. Save session
• 3. Overview
  • 3.1. The Main Toolbar
  • 3.2. The Start Page
  • 3.3. The Organize Page
  • 3.4. The Analyze Page
  • 3.5. The Segment Page
  • 3.6. The Visualize Page
  • 3.7. The Statistics Page
  • 3.8. Mouse and Keyboard Controls
    • 3.8.1. 2D Viewer
    • 3.8.2. Contour Editing (Analyze Page)
    • 3.8.3. 3D Scene Viewer (Segment + Visualize Pages)
• 4. Common Workflows
  • 4.1. Selecting and loading a study
  • 4.2. Flow Data Pre-Processing
  • 4.3. Vessel Segmentation
    • 4.3.1. Tutorial
  • 4.4. Segmentation using an Additional Dataset
    • 4.4.1. Tutorial
  • 4.5. Working with the Vessel Object
    • 4.5.1. Surface Commands
    • 4.5.2. Center Line Commands
    • 4.5.3. Contour Commands
    • 4.5.4. Segment Commands
    • 4.5.5. Statistical Analysis
  • 4.6. Assessing Wall Shear Stress
    • 4.6.1. Calculation
    • 4.6.2. Visualization
    • 4.6.3. Atlas Generation
  • 4.7. Particle Statistics
    • 4.7.1. Masking the velocity field
    • 4.7.2. Weighted velocity map
    • 4.7.3. Create a 3D segmentation mask
    • 4.7.4. Create a segmentation command
    • 4.7.5. Configure the segmentation command
    • 4.7.6. Edit the segmentation mask
    • 4.7.7. Create a vessel surface mesh
    • 4.7.8. Smooth and simplify surface mesh
    • 4.7.9. Generate the vessel center-line
    • 4.7.10. Generate the vessel center-line (cont.)
    • 4.7.11. Generate vessel contours
    • 4.7.12. Generate vessel contours (cont.)
    • 4.7.13. Generate vessel segments
    • 4.7.14. Final segmentation result
    • 4.7.15. Vessel scene node
    • 4.7.16. Generate path lines
    • 4.7.17. Visualize path lines and particles
    • 4.7.18. Fine-tune visualization
    • 4.7.19. Particle statistics window
    • 4.7.20. Particle statistics
  • 4.8. Exploring Statistics
  • 4.9. Data Export Options in GTFlow
  • 4.10. Assessing Pulse Wave Velocity

Indices and tables

• Index

• Module Index

• Search Page